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General Plan

Week One: Markers and Models January 12, 14 1. HELLO Basic class greetings/mechanics 2. READ chapters 1,2 of Molecular Ecology (Freelan...

Last Lecture

[Download file "8420 week 13.pdf"] Sometimes lectures are useful, sometimes you can get fired up about a topic, sometimes it sets off good discussion...

Week 9 sorry for the delay

[Download file "Week9_8420.pdf"]

brouillon

"In French, the word for a rough draft is brouillon, derived from a verb meaning "to place in disorder, to scramble." This metaphor suggests a wr...

Molecular Ecology

Spring 2016 Tuesday/Thursday 930-1045, Ecology Conference Room This class is fundamentally about ecology - the study of the distr...

Phylogeography

[Download file "Week7-8420 phylogeography.pdf"] So now we are covering phylogeography! Tuesday I gave my pitch for what it means in the 201x's, ho...

starting with Structure

[Download file "Week6-8420.pdf"] This was my Tuesday morning attempt to walk you through the logic of how we use basic genetic models (Hardy-Weinberg...

Week 5

OK, the notes from Tuesday lecture: [Download file "week5gene8420.pdf"] The software that we played with to better understand the contributions ...

Week 4 - getting into F stats

I hope my "XIJ" approach to F-statistics is a helpful generalization. Attached is the lecture that I (mostly) got through on Tuesday, which goes alon...

Week 3

As always, my estimates of the time it takes to cover topics varies wildly from the truth. We probably spent too much time on the vague experimental ...

ms/sumstats

Installation of ms: http://home.uchicago.edu/rhudson1/source/mksamples.html and follow links to FTP page, download msdir and the PDF that sup...

Models

"All models are wrong, but some are useful." With this adage in mind, the first week was more lecture-y than I hope the rest of the semester will be....

Lots to Read

Well, the semester is starting. Today I'm prepping for day one. One thing that is always tricky when teaching a course with new material, is how much...

Course WikiEdu

Course Page: Your course page will be the central hub for your Wikipedia assignment. From there, you can edit your timeline and easily track the...

Projects

Idea 1. Copepod diversity. [copepod_calanoid.jpg] Monthly sample of seawater from UGA's Skidaway Institute near Savannah, towed through a 125-µ...

Readings

Week X Why are populations a more important indicator for distributional studies than "species"? How is phylogenetic reconstruction of diver...